CDS

Accession Number TCMCG081C33453
gbkey CDS
Protein Id XP_010663940.1
Location complement(join(16343075..16343079,16346984..16347236,16348998..16349127,16376012..16376089,16395813..16395958,16397644..16397910,16406258..16406506,16409434..16409571,16427478..16427576,16437340..16437531,16452000..16452489,16453969..16453979))
Gene LOC100246030
GeneID 100246030
Organism Vitis vinifera

Protein

Length 685aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_010665638.2
Definition PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X3 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category P
Description Cyclic nucleotide-gated ion channel 20
KEGG_TC 1.A.1.5
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04040        [VIEW IN KEGG]
KEGG_ko ko:K05391        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04626        [VIEW IN KEGG]
map04626        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005216        [VIEW IN EMBL-EBI]
GO:0005244        [VIEW IN EMBL-EBI]
GO:0005249        [VIEW IN EMBL-EBI]
GO:0005261        [VIEW IN EMBL-EBI]
GO:0005267        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006813        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008324        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009624        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015077        [VIEW IN EMBL-EBI]
GO:0015079        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022832        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022838        [VIEW IN EMBL-EBI]
GO:0022839        [VIEW IN EMBL-EBI]
GO:0022843        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022890        [VIEW IN EMBL-EBI]
GO:0030001        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0042391        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046873        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071804        [VIEW IN EMBL-EBI]
GO:0071805        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098655        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098662        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACAACAGGTCAGAAGTATTAGAAATGAGTGATCTTGAAAAAGATGAGACGCCAATGCTTTCAGAGGCTCATTCACAATATTTGGATGAACCTAGGGTTTCTCACTCGCATAGACGTACCTCTAGAAATCGGAGTGCATCCATTTCCATTCCTATGAACTCCATGGAGTCCTATCAAACTGAAAGCAGCCTTGTAAGTCATACTGGTCCCTTGAGGAATGAAAAGAAAACTCCGTTCATACCAATGAGTGGCCCACTGTTAAAATCTGAGGGCTTATTTCCACCTACTCCTGGTGTACGGGGCCACAGAAAGGCAGAGCCAAGGGCAGAAAATTTTCCTTCATTTAATGGAATGGAATGGAATAATCGGCCCCATAACAACTATGCTGGAAAAAATGAACATCTTCTGAGATCTGGACAGTTGGGAGTATGTAATGATCCTTACTGCACAATATGCCCAACACATTTCATTGACTCTAGACAGCAAAGGAACTCAAAGTTTCATTCTGCTTTCTATGGAGATGCTAGAGGATGGGCAAGGAGATTTTTTTCTTCTCTACAATCATATGTTCCTGGAATCATGAACCCTCATACTAAAGTTGTTCAACGATGGAACAGATTTTTTGTCATTTCTTGCTTGTTGGCAATTTTTGTGGACCCTTTATTTTTCCTCTTGCTGTCTGTGCAACAGGAAAATAAGTGCATAATTATTGACATGCCCCTAACAAAAACAATTGTGGTATTCAGAAGCATGACTGATTTCATTTACCTGTTAAACATGCTTCTACAGTTTAGGCTTGCCTATGTTGCTCCAGAGTCTAGAGTGGTTGGTGCTGGCGACCTAGTTGACCATCCAAAAAAAATTGCTATCCATTACCTTTGTGGATATTTTTTAATTGATTTATTTATTGTTTTACCGCTTCCTCAAATCATGATTTTGCTGGTCCTACCCATGTCCTTGGGAACATCTGGGGCAAATTATGCAAAGAATCTTTTGCGCACAGCAGTTCTTGTTCAGTACATTCCCAGGTTGTACAGGTTTCTACCTTTCCTTGCTGGTCAGTCTCCAAGTGGCTTCATATTTGAGTCAGCATGGGCGAATTTTGTTATAAATCTTCTCACTTTTGTGTTGTCTGGTCATGTTGTGGGGTCATGCTGGTACCTCTTTGGCTTACAGAGGGTAAATCAATGTCTTCGAGATGCCTGCCATAACTCCATAATAAAAAATTGTATGGATTTCATTGATTGTGGTCATGGGGAGAAAGTTAGAGATTTTAGAGATTTGCGAAATTTAGATTGGCAACCCTGGAAAAGCAATGAAAATGCTAGTGCTTGTTTCAGCGATGATGGTTTCCCGTATGGGATCTACACTAAAGCTGTCATTCTTACCACAAAACCTAGTATTGTGACGAGATATACATATTCATTGTTTTGGGGGTTCCAGCAAATCAGTACTTTGGCTGGGAATCAAACTCCGAGCTATTTTCTTTGGGAAGTCCTTTTTACTATGGGCATTATTGGTCTAGGCTTGTTGCTCTTTGCTCTTCTAATTGGAAATATGCAGAACTTCCTACAGGCTCTTGGACGAAGAAGGTTAGAAATGTCACTACGACGTCGTGATGTTGAGCAGTGGATGAGCCATCGACGGTTGCCTGAAGATCTTAGAAGGCAAGTACGTCAGGCAGAACGCTATAATTGGGCTGCCACCAGAGGGGTAAATGAAGAAATGCTAATGGAAAATTTGCCTGAAGATCTCCAAAGAGAAATACGACGCCATCTCTTCAAATTTGTAAAGAATGTCCACATTTTTTCCAAGATGGGTGATTCCAAGATGGGTGATACGATCTTAGATGCCATTTGTGAGAGACTAAGACAAAAAACATACATCAAAGGAAGCAAAATTTTATGTGATGGAGGTCTAATTGAGAAGATGGTTTTTATTGTGCGCGGGAAGATGTTGAGCAATGGAGTTGCAACTCCCTTAGGTGAAGGGGATGTTTGTGGCGAGGAACTTCTTGCTTGGTGTATTGAGAATTCTTCAGTGAACAAAGATTGA
Protein:  
MDNRSEVLEMSDLEKDETPMLSEAHSQYLDEPRVSHSHRRTSRNRSASISIPMNSMESYQTESSLVSHTGPLRNEKKTPFIPMSGPLLKSEGLFPPTPGVRGHRKAEPRAENFPSFNGMEWNNRPHNNYAGKNEHLLRSGQLGVCNDPYCTICPTHFIDSRQQRNSKFHSAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQRWNRFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDMPLTKTIVVFRSMTDFIYLLNMLLQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLCGYFLIDLFIVLPLPQIMILLVLPMSLGTSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSPSGFIFESAWANFVINLLTFVLSGHVVGSCWYLFGLQRVNQCLRDACHNSIIKNCMDFIDCGHGEKVRDFRDLRNLDWQPWKSNENASACFSDDGFPYGIYTKAVILTTKPSIVTRYTYSLFWGFQQISTLAGNQTPSYFLWEVLFTMGIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPEDLRRQVRQAERYNWAATRGVNEEMLMENLPEDLQREIRRHLFKFVKNVHIFSKMGDSKMGDTILDAICERLRQKTYIKGSKILCDGGLIEKMVFIVRGKMLSNGVATPLGEGDVCGEELLAWCIENSSVNKD